Protein-Protein Complexes
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Manually selected representative complexes (Last update: 2007-04-18)
Selection criteria
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Automatically selected representative complexes (Last update: 2009-06-04)
Selection criteria
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Build the database of protein-protein co-crystallized structures
(complexes are represented by 2 interacting chains from PDB entry)
Focus on one PDB CODE:
(4 characters eg, 1avz)
Filters for PDB entries:
RESOLUTION:
(Maximal resolution)
AEROSPACI SCORE:
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(Minimal aerospaci score)
MULTIMERIC STATE:
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Minimal (≥ 2):
Maximal:
COMPLEX TYPE:
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HOMO
HETERO
Filters for interfaces:
Mean area buried / chain (Ų):
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Minimal:
Maximal:
Number of Interface Residues:
(Minimal number)
Include following complexes:
ALTERNATIVE BINDING MODE.....:
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DNA/RNA.............................:
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MEMBRANE ASSOCIATED ............:
LIGAND................................:
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HOMO-N-ARY................................:
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HETERO-N-ARY...................:
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DISORDERED.................................:
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TANGLED.............................:
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S-S BOND BETWEEN CHAINS......:
Filters for chains (at least one chain must match):
Match partial or total SCCS SCOP number:
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(eg : d.126.1.1 d.126.1. d.126.1 d.126. d.126 d. or d (dot is important to separate levels))
Number of SCOP domains (in both chains):
Minimal:
Maximal:
Match partial or total GI number:
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On the results page, we offer options to exclude redundancies based on sequence or structural similarities.
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Vakser Lab